CDS

Accession Number TCMCG057C48965
gbkey CDS
Protein Id XP_018452045.1
Location join(16779121..16779183,16779717..16779823,16779899..16780031,16780125..16780427,16780511..16780584,16780651..16780726,16780811..16780866,16780949..16781036,16781110..16781250,16781343..16781492,16781570..16781764)
Gene LOC108823362
GeneID 108823362
Organism Raphanus sativus

Protein

Length 461aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA344915
db_source XM_018596543.1
Definition PREDICTED: hydroxymethylglutaryl-CoA synthase [Raphanus sativus]

EGGNOG-MAPPER Annotation

COG_category I
Description This enzyme condenses acetyl-CoA with acetoacetyl-CoA to form HMG-CoA, which is the substrate for HMG-CoA reductase
KEGG_TC -
KEGG_Module M00088        [VIEW IN KEGG]
M00095        [VIEW IN KEGG]
KEGG_Reaction R01978        [VIEW IN KEGG]
KEGG_rclass RC00004        [VIEW IN KEGG]
RC00503        [VIEW IN KEGG]
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko00002        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
KEGG_ko ko:K01641        [VIEW IN KEGG]
EC 2.3.3.10        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway ko00072        [VIEW IN KEGG]
ko00280        [VIEW IN KEGG]
ko00650        [VIEW IN KEGG]
ko00900        [VIEW IN KEGG]
ko01100        [VIEW IN KEGG]
ko01110        [VIEW IN KEGG]
ko01130        [VIEW IN KEGG]
map00072        [VIEW IN KEGG]
map00280        [VIEW IN KEGG]
map00650        [VIEW IN KEGG]
map00900        [VIEW IN KEGG]
map01100        [VIEW IN KEGG]
map01110        [VIEW IN KEGG]
map01130        [VIEW IN KEGG]
GOs GO:0003674        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0004421        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005829        [VIEW IN EMBL-EBI]
GO:0005911        [VIEW IN EMBL-EBI]
GO:0006084        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006163        [VIEW IN EMBL-EBI]
GO:0006629        [VIEW IN EMBL-EBI]
GO:0006637        [VIEW IN EMBL-EBI]
GO:0006644        [VIEW IN EMBL-EBI]
GO:0006720        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006732        [VIEW IN EMBL-EBI]
GO:0006753        [VIEW IN EMBL-EBI]
GO:0006790        [VIEW IN EMBL-EBI]
GO:0006793        [VIEW IN EMBL-EBI]
GO:0006796        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008299        [VIEW IN EMBL-EBI]
GO:0008610        [VIEW IN EMBL-EBI]
GO:0008654        [VIEW IN EMBL-EBI]
GO:0009058        [VIEW IN EMBL-EBI]
GO:0009117        [VIEW IN EMBL-EBI]
GO:0009150        [VIEW IN EMBL-EBI]
GO:0009240        [VIEW IN EMBL-EBI]
GO:0009259        [VIEW IN EMBL-EBI]
GO:0009506        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0016740        [VIEW IN EMBL-EBI]
GO:0016746        [VIEW IN EMBL-EBI]
GO:0019287        [VIEW IN EMBL-EBI]
GO:0019637        [VIEW IN EMBL-EBI]
GO:0019693        [VIEW IN EMBL-EBI]
GO:0030054        [VIEW IN EMBL-EBI]
GO:0033865        [VIEW IN EMBL-EBI]
GO:0033875        [VIEW IN EMBL-EBI]
GO:0034032        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0035383        [VIEW IN EMBL-EBI]
GO:0043603        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044249        [VIEW IN EMBL-EBI]
GO:0044255        [VIEW IN EMBL-EBI]
GO:0044281        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0046490        [VIEW IN EMBL-EBI]
GO:0046912        [VIEW IN EMBL-EBI]
GO:0051186        [VIEW IN EMBL-EBI]
GO:0055044        [VIEW IN EMBL-EBI]
GO:0055086        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0072521        [VIEW IN EMBL-EBI]
GO:0090407        [VIEW IN EMBL-EBI]
GO:1901135        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901564        [VIEW IN EMBL-EBI]
GO:1901576        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGCGGAGAACGTTGGGATTCTGGCTATGGACATCTATTTTCCTCCTACCTGTGTTCAACAGGAAGCTTTGGAAGCTCATGATGGAGCAAGCAAAGGCAAATACACCATTGGTCTTGGCCAAGATTGTCTAGCTTTCTGCACTGAGCTTGAAGATGTTATCTCAATGAGTTTCAATGCGGTGACATCTCTTCTAGAAAAGTATAAGATCGACCCCAAGCAAATTGGGCGTCTTGAAGTAGGAAGTGAGACTGTCATTGACAAAAGCAAGTCCATCAAAACCTTCTTGATGCAACTCTTTGAGAAATGTGGAAACACTGATGTGGAAGGTGTTGACTCGACCAACGCTTGTTATGGTGGAACTGCAGCTTTGCTAAACTGTGTCAATTGGGTTGAGAGTAACTCTTGGGATGGACGCTATGGCCTTGTCATCTGTACTGACAGTGCGGTATATGCAGAAGGACCTGCAAGGCCCACTGGAGGAGCAGCAGCGATTGCTATGTTGATAGGACCTAATGCTCCTATCGTCTTCGAAAGCAAACTGAGAGGAAGCCACATGGCTCATGTCTATGACTTTTACAAACCAAATCTTGCTAGCGAGTACCCTGTTGTTGATGGTAAGCTTTCACAGACTTGCTACCTTATGGCACTTGACTCCTGCTATAAACATTTATGCAACAAGTTTGAGAAACTCGAAGGCAAAGAGTTCTCCATCAATGATGCAGACTACTTTGTGTTCCATTCTCCATACAACAAACTTGTACAGAAAAGCTTTGCTCGTCTCTTGTACAACGACTTCTTGAAAAACGCAAGCTCCATTGACGAGGCTGCCAAAGAGAAGTTCACTCCTTACTCGTCTTTGTCACTCGACGAGAGTTACCAAAGCCGTGATCTTGAAAAGGTGTCACAACAAGTTGCCAAAAGTTTTTATGATGCTAAAGTGCAACCAACGACTTTAGTACCAAAACAAGTGGGTAACATGTACACTGCTTCTCTCTACGCAGCTTTTGCTTCTCTCATCCACAACAAACACAGCGACTTGGCCGGAAAGAGGGTGGTTATGTTCTCATATGGAAGTGGTTCAACCGCAACAATGTTTTCATTGCGTCTCTGCGAAAACCAGTCTCCTTTCAGCCTCTCAAACATTGCATCTGTAATGGACGTAGGCGGTAAACTGGAGTCTAGACATGAGTATGCACCTGAGAAATTTGTGGAGACAATGAAGCTGATGGAACATAGGTACGGAGCAAAGGAGTTTGTGACGAGCAAAGAAGGTATCATAGACCTTTTGGCTCCGGGAACTTATTATCTGAAAGAGGTTGATTCATTGTACCGGAGATTCTATGGCAAGAAAGGAGACGATGGATCCATAGCCAATGGTCACTGA
Protein:  
MAENVGILAMDIYFPPTCVQQEALEAHDGASKGKYTIGLGQDCLAFCTELEDVISMSFNAVTSLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQLFEKCGNTDVEGVDSTNACYGGTAALLNCVNWVESNSWDGRYGLVICTDSAVYAEGPARPTGGAAAIAMLIGPNAPIVFESKLRGSHMAHVYDFYKPNLASEYPVVDGKLSQTCYLMALDSCYKHLCNKFEKLEGKEFSINDADYFVFHSPYNKLVQKSFARLLYNDFLKNASSIDEAAKEKFTPYSSLSLDESYQSRDLEKVSQQVAKSFYDAKVQPTTLVPKQVGNMYTASLYAAFASLIHNKHSDLAGKRVVMFSYGSGSTATMFSLRLCENQSPFSLSNIASVMDVGGKLESRHEYAPEKFVETMKLMEHRYGAKEFVTSKEGIIDLLAPGTYYLKEVDSLYRRFYGKKGDDGSIANGH